1 #ifndef ALIGNMENTDEFS_H
2 #define ALIGNMENTDEFS_H
7 namespace AlignmentDefs
38 static constexpr
int NGL = 6;
39 static constexpr
int NLC = 5;
42 static const std::map<unsigned int, unsigned int>
base_layer_map = {{10, 0}, {12, 3}, {14, 7}, {16, 55}};
48 {{3,4,5,6,7,8,0,0,0,0},
49 {0,1,2,9,10,11,0,0,0,0}},
50 {{4,5,6,7,8,9,10,11,0,0},
51 {0,1,2,3,12,13,14,15,0,0}},
52 {{5,6,7,8,9,10,11,12,13,14},
53 {0,1,2,3,4,15,16,17,18,19 }} };
73 float glbl_derivative[],
int glbl_label[]);